Impact de la variation du niveau d'eau d'un marais du lac Saint-Pierre (Québec, Canada) sur les concentrations et les flux d'hydrogène, monoxyde de carbone, méthane et dioxyde de carbone

Le but de la présente étude était d'étudier l'impact de la variation des niveaux d'eau d'un marais d'eau douce (Baie Saint-François, Québec) sur l'évolution des concentrations et des flux d'hydrogène, monoxyde de carbone, méthane et dioxyde de carbone. Une approche originale impliquant l'association d'un gradient de concentration de ces composés sur un profil vertical de 1,5 m au transfert de flux turbulent micrométéorologique fut utilisée pour la détermination des flux. L'étude démontre qu'une hausse du niveau d'eau d'un bassin versant alimentant une zone humide influence les flux de méthane, de monoxyde de carbone d'hydrogène et de dioxyde de carbone. En conditions submergées, le marais émettait du méthane et du monoxyde de carbone et consommait moins d'hydrogène troposphérique. Ainsi, cette étude démontre que des mesures in situ peuvent servir à inférer des scénarios d'impacts possibles des changements climatiques et des variations des niveaux d'eau sur les émissions des gaz à effets de serre dans l'écosystème du fleuve Saint-Laurent.Wetlands are known for their great biodiversity and the important carbon reservoir that they represent. Moreover, in the global warming context, these ecosystems represent net sources or sinks for different greenhouse gases depending of their conditions. For instance, flooded conditions favour methane production whereas they prevent hydrogen and carbon monoxide soil consumption. Baie Saint-François is a freshwater wetland that opens onto Lake Saint-Pierre (St. Lawrence River) where water levels are subject to important fluctuations due to natural processes and human activities (hydroelectricity and navigation). This study was done in order to assess the impact of the Lake Saint-Pierre water level variations on the tropospheric methane, carbon monoxide, hydrogen and carbon dioxide dynamics over the wetland. Knowledge of these dynamics should provide indications about the possible effects of the decreasing or increasing water level associated with the global warming on the production or consumption of these trace gases.Studies were carried out between June and August 2003 in Baie Saint-François where soil was subjected to successions of flooded and dry conditions. Water and carbon dioxide fluxes were obtained with a Bowen ratio micrometeorological station including a high frequency single infrared gas analyser. Hydrogen, carbon monoxide and methane fluxes were estimated with the modified Bowen method, their vertical concentration gradients (1.5 m) were measured over the plant canopy. The Bowen Ratio station was equipped with different probes to measure parameters such as net radiations, soil heat fluxes and vertical temperature gradients. The turbulent transfer coefficient (k) obtained every 20 min was assumed equal for heat, water vapour and trace gases. Hence, fluxes calculations were done by the multiplication of the turbulent transfer coefficients with the vertical concentration gradients of hydrogen, carbon monoxide and methane.The instrument used to detect hydrogen, carbon monoxide and methane was a RGA5. This analyser has two detectors: the reductive gas detector (RGD) for hydrogen and carbon monoxide and a flame ionisation detector (FID) for methane. The RGD contains an HgO bed wherein oxygen reacts with reductive gases resulting in Hg° releases detectable by differential UV absorbance. Chemicals were detected continuously in 10 min cycles with an analytical reproducibility of ±0.2, 0.3 and 2% for hydrogen, carbon monoxide and methane. Generally, vertical concentration gradients measured were greater than these limits. A calibration gas containing hydrogen, carbon monoxide and methane at 4940, 1000 and 1000 ppbv respectively in nitrogen was analysed daily to verify calibration. To ensure data integrity, linearity of the instrument was assayed by several dilutions of the standard gas and the integration of the curves gave a correction factor for hydrogen (18%) and carbon monoxide (13%). An intercomparison with NOAA (National Oceanic and Atmospheric Administration) was done to corroborate these correction factors.Background carbon monoxide, methane and carbon dioxide levels were in agreement with literature values. However, hydrogen was low, as observed by other investigators in summertime, since this season is related to minimal concentrations. Methane followed a diurnal cycle where maximum levels were observed during nighttime. In wet conditions, these nocturnal peaks reached occasionally 4000 ppbv and could be explained by specific production mechanisms and diurnal changes of vertical mixing in the boundary layer. Sensitivity of the processes responsible for methane and carbon monoxide cycling was seen between July 21st and 26th where a rain episode (total precipitation of 33.2 mm) increased their background concentrations. It seems that this precipitation was enough to favour methanogenesis and inhibit tropospheric CO and CH4 consumptions by a reduction of the diffusion of these chemicals into the soil.Our results demonstrated that four to eleven days following a variation of the Lake Saint-Pierre water level, a change in the tropospheric hydrogen, carbon monoxide and methane concentrations was observed. This lag might be explained by the distance between the lake and the research station (about 1.5 km) and the required time for the adaptation of soil microorganisms to the disruption of their environment. The concentration variations of these chemicals resulted from the inhibition of the processes responsible for their consumption or the activation of the processes accountable for their production.In June, the wetland was flooded and the CO2 median flux was -56.5 g m-2 d-1. Fluxes increased significantly (Mann-Whitney, α=0.01) in July to 5.30 g m-2 d-1, possibly due to dry conditions. Indeed, absence of water favours the activity of soil aerobic microorganisms which might produce more carbon dioxide than the quantity used by plants during photosynthesis.Methane was produced in June where the median flux was 54 mg m-2 d-1. These emissions were caused by the presence of water which maintained anaerobic conditions in the sediments, a suitable environment for methanogenic microorganisms. July was characterised by dry conditions, which generated aerobic environments in soils, an unfavourable microniche for methanogens. Therefore, methane median fluxes decreased significantly (Mann-Whitney, α=0.05) to 0.011 mg m-2 d-1 in July. In August, before the end of the investigation period, water levels had increased but methane fluxes were not significantly higher than in July. Moreover, in this period, methane concentrations tended to increase, showing that after an augmentation of the Lake Saint-Pierre water level, Baie Saint-François flooding area could represent a methane source.During summer 2003, Baie Saint-François acted as a net source of carbon monoxide. In June, the median flux was 21 µg m-2 d-1 due to presence of water which inhibited consumption by soil. Emissions were significantly (Mann-Whitney, α=0.05) lower in July (15 µg m-2 d-1) due to the absence of water, which represented a suitable environment for microorganisms consuming tropospheric carbon monoxide. In August, the median carbon monoxide flux attained 65 µg m-2 d-1 due to an increase of the Lake Saint-Pierre water level. Net carbon monoxide emissions observed in wet and dry conditions might be due to the high organic content in soil and water in addition to the presence of plants since all of these are subjected to photooxidation, generating this pollutant. Therefore, an increase of the Lake Saint-Pierre water level is associated with an augmentation of tropospheric carbon monoxide due to the inhibition of the processes responsible of its consumption.A decline in the water level might result in the activation of the soil microorganisms (or abiotic hydrogenases) able to consume tropospheric hydrogen. At the beginning of the campaign (June), the median hydrogen flux was weak (-1.37 g m-2 d-1) due to the presence of water. However, a net soil consumption was seen in July, where the median hydrogen flux decreased to -125 g m-2 d-1. The Lake Saint-Pierre water level increase observed in August was associated with a significant (Mann-Whitney, α=0.05) augmentation of the hydrogen median flux to 299 g m-2 d-1. Consequently, a rise in the Lake Saint-Pierre water levels induced an inhibition of the processes responsible of the tropospheric hydrogen consumption.This study illustrated that the water level fluctuations of the Lake Saint-Pierre have an impact on the H2, CO, CH4 and CO2 dynamics over the surrounding wetlands. When the Lake Saint-Pierre water level decreased, the wetlands acted as a carbon monoxide and carbon dioxide source, but as a consumer of tropospheric hydrogen and a minor source of methane

Oscillations in the expression of a self-repressed gene induced by a slow transcriptional dynamics

We revisit the dynamics of a gene repressed by its own protein in the case where the transcription rate does not adapt instantaneously to protein concentration but is a dynamical variable. We derive analytical criteria for the appearance of sustained oscillations and find that they require degradation mechanisms much less nonlinear than for infinitely fast regulation. Deterministic predictions are also compared with stochastic simulations of this minimal genetic oscillator

Oscillations in the expression of a self-repressed gene induced by a slow transcriptional dynamics

We revisit the dynamics of a gene repressed by its own protein in the case where the transcription rate does not adapt instantaneously to protein concentration but is a dynamical variable. We derive analytical criteria for the appearance of sustained oscillations and find that they require degradation mechanisms much less nonlinear than for infinitely fast regulation. Deterministic predictions are also compared with stochastic simulations of this minimal genetic oscillator

The impact of smoke-free legislation on fetal, infant and child health: a systematic review and meta-analysis protocol

INTRODUCTION: Second-hand smoke (SHS) exposure is estimated to kill 600 000 people worldwide annually. The WHO recommends that smoke-free indoor public environments are enforced through national legislation. Such regulations have been shown to reduce SHS exposure and, consequently, respiratory and cardiovascular morbidity. Evidence of particular health benefit in children is now emerging, including reductions in low birthweight deliveries, preterm birth and asthma exacerbations. We aim to comprehensively assess the impact of smoke-free legislation on fetal, infant and childhood outcomes. This can inform further development and implementation of global policy and strategies to reduce early life SHS exposure. METHODS: Two authors will search online databases (1975–present; no language restrictions) of published and unpublished/in-progress studies, and references and citations to articles of interest. We will consult experts in the field to identify additional studies. Studies should describe associations between comprehensive or partial smoking bans in public places and health outcomes among children (0–12 years): stillbirth, preterm birth, low birth weight, small for gestational age, perinatal mortality, congenital anomalies, bronchopulmonary dysplasia, upper and lower respiratory infections and wheezing disorders including asthma. The Cochrane Effectiveness Practice and Organisational Care (EPOC)-defined study designs are eligible. Study quality will be assessed using the Cochrane 7-domain-based evaluation for randomised and clinical trials, and EPOC criteria for quasiexperimental studies. Data will be extracted by two reviewers and presented in tabular and narrative form. Meta-analysis will be undertaken using random-effects models, and generic inverse variance analysis for adjusted effect estimates. We will report sensitivity analyses according to study quality and design characteristics, and subgroup analyses according to coverage of ban, age group and parental/maternal smoking status. Publication bias will be assessed. ETHICS AND DISSEMINATION: Ethics assessment is not required. RESULTS: Will be presented in one manuscript. The protocol is registered with PROSPERO, registration number CRD42013003522

Surface plasmons at the Brillouin zone boundary of an oblique lattice

Copyright © 2015 AIP PublishingIn periodic systems of low-symmetry, the Bragg condition for the complete interference of waves along the contour of the Brillouin zone (BZ) boundary is not generally satisfied. As a result, band-gaps do not necessarily occur at this boundary. This letter demonstrates this experimentally by recording the iso-frequency contours for surface plasmon polaritons (SPPs) supported on a diffraction grating with an underlying 2D oblique Bravias lattice. It is shown that these contours do not intersect the BZ boundary perpendicularly, as the symmetry operations of the lattice place no conditions on the surface wave interference at this boundary.Engineering and Physical Sciences Research Council (EPSRC)HP Labs BristolUSA

Natural occurrence of entomopathogenic nematodes (Rhabditida : Steinernematidae and Heterorhabditidae) in Guadeloupe islands

Des prospections ont été réalisées sur 538 sites en Guadeloupe (Grande Terre, Basse Terre) et dans ses dépendances (Marie-Galante, La Désirade, Petite Terre, Les Saintes, Saint-Barthélémy, Saint-Martin) pour rechercher des nématodes entomopathogènes par la technique du piège à insecte (#FGalleria mellonella$). Sur 35 sites positifs (6$ (97%) et l'un d'eux un #Steinernema$(3$ (88%) et #H. bacteriophora$(12$ appartient sans doute à une nouvelle espèce en cours d'étude. Les nématodes ont été isolés en zone côtière (91,4%), en zone tropicale de basse (5,7%) et de moyenne altitude (2,9%). Aucun nématode n'a été trouvé en zone montagneuse. (Résumé d'auteur

Direct mapping of surface plasmon dispersion using imaging scatterometry

© 2013 American Institute of PhysicsThe iso-frequency contours of diffracted surface plasmons on metallic bigratings have been directly recorded using imaging scatterometry. Metallic rectangular bigratings, formed of two “crossed” surface relief gratings, are used to demonstrate this measurement technique. By deepening one of the constituent gratings, control of the surface plasmon dispersion anisotropy is shown in the recorded iso-frequency maps. Collating the iso-frequency contours over a range of wavelengths from 500 nm to 700 nm leads to a three-dimensional map of the surface plasmon dispersion

Microsatellites for the marsh fritillary butterfly: de novo transcriptome sequencing, and a comparison with amplified fragment length polymorphism (AFLP) markers.

Journal ArticleResearch Support, Non-U.S. Gov'tBACKGROUND: Until recently the isolation of microsatellite markers from Lepidoptera has proved troublesome, expensive and time-consuming. Following on from a previous study of Edith's checkerspot butterfly, Euphydryas editha, we developed novel microsatellite markers for the vulnerable marsh fritillary butterfly, E. aurinia. Our goal was to optimize the process in order to reduce both time and cost relative to prevailing techniques. This was accomplished by using a combination of previously developed techniques: in silico mining of a de novo assembled transcriptome sequence, and genotyping the microsatellites found there using an economic method of fluorescently labelling primers. PRINCIPAL FINDINGS: In total, we screened nine polymorphic microsatellite markers, two of which were previously published, and seven that were isolated de novo. These markers were able to amplify across geographically isolated populations throughout Continental Europe and the UK. Significant deviations from Hardy-Weinberg equilibrium were evident in some populations, most likely due to the presence of null alleles. However, we used an F(st) outlier approach to show that these markers are likely selectively neutral. Furthermore, using a set of 128 individuals from 11 populations, we demonstrate consistency in population differentiation estimates with previously developed amplified fragment length polymorphism (AFLP) markers (r = 0.68, p<0.001). SIGNIFICANCE: Rapid development of microsatellite markers for difficult taxa such as Lepidoptera, and concordant results with other putatively neutral molecular markers, demonstrate the potential of de novo transcriptional sequencing for future studies of population structure and gene flow that are desperately needed for declining species across fragmented landscapes.BBSRCOkinawa Institute for Science and Technology (OIST

A neo-W chromosome in a tropical butterfly links colour pattern, male-killing, and speciation

PublishedJournal Article© 2016, Royal Society of London. All rights reserved.Sexually antagonistic selection can drive both the evolution of sex chromosomes and speciation itself. The tropical butterfly the African Queen, Danaus chrysippus, shows two such sexually antagonistic phenotypes, the first being sex-linked colour pattern, the second, susceptibility to a male-killing, maternally inherited mollicute, Spiroplasma ixodeti, which causes approximately 100% mortality in male eggs and first instar larvae. Importantly, this mortality is not affected by the infection status of the male parent and the horizontal transmission of Spiroplasma is unknown. In East Africa, male-killing of the Queen is prevalent in a narrow hybrid zone centred on Nairobi. This hybrid zone separates otherwise allopatric subspecies with different colour patterns. Here we show that a neo-W chromosome, a fusion between the W (female) chromosome and an autosome that controls both colour pattern and malekilling, links the two phenotypes thereby driving speciation across the hybrid zone. Studies of the population genetics of the neo-W around Nairobi showthat the interaction between colour pattern and male-killer susceptibility restricts gene flow between two subspecies of D. chrysippus. Our results demonstrate how a complex interplay between sex, colour pattern, malekilling, and a neo-W chromosome, has set up a genetic ‘sink’ that keeps the two subspecies apart. The association between the neo-W and male-killing thus provides a ‘smoking gun’ for an ongoing speciation process.Matt McClements (Blink Studios Ltd) designed the figures, Bernard Rono assisted with fieldwork, and Samuel Katoi provided specimens from Watamu. Fieldwork at Silole Sanctuary (Kitengela) was sanctioned by Nani Croze, Eric Krystall, John Keen, and Mark van Rampelberg. Simon Martin scrutinized the first draft of the manuscript and made valuable suggestions for its improvement. Spiroplasma screening was carried out at icipe. D.A.S.S. thanks the Linnean Society of London and the Outreach Fund of the Royal Entomological Society of London for funding. I.J.G., D.A.S.S., W.T., and K.S. are Research Affiliates of the National Museums of Kenya