1,073 research outputs found
Where the linearized Poisson-Boltzmann cell model fails: (I) spurious phase separation in charged colloidal suspensions
We perform a linearization of the Poisson-Boltzmann (PB) density functional
for spherical Wigner-Seitz cells that yields Debye-H\"uckel-like equations
agreeing asymptotically with the PB results in the weak-coupling
(high-temperature) limit. Both the canonical (fixed number of microions) as
well as the semi-grand-canonical (in contact with an infinite salt reservoir)
cases are considered and discussed in a unified linearized framework. In the
canonical case, for sufficiently large colloidal charges the linearized theory
predicts the occurrence of a thermodynamical instability with an associated
phase separation of the homogeneous suspension into dilute (gas) and dense
(liquid) phases. In the semi-grand-canonical case it is predicted that the
isothermal compressibility and the osmotic-pressure difference between the
colloidal suspension and the salt reservoir become negative in the
low-temperature, high-surface charge or infinite-dilution (of polyions) limits.
As already pointed out in the literature for the latter case, these features
are in disagreement with the exact nonlinear PB solution inside a Wigner-Seitz
cell and are thus artifacts of the linearization. By using explicitly
gauge-invariant forms of the electrostatic potential we show that these
artifacts, although thermodynamically consistent with quadratic expansions of
the nonlinear functional and osmotic pressure, may be traced back to the
non-fulfillment of the underlying assumptions of the linearization.Comment: 32 pages, 3 PostScript figures, submitted to J. Chem. Phy
Comparison of different procedures to map reference evapotranspiration using geographical information systems and regression-based techniques
16 páginas, 6 figuras, 8 tablas.This paper compares different procedures for mapping reference evapotranspiration (ETo) by means of regression-based techniques and geographical information systems (GIS). ETo is calculated following the method of Hargreaves (HG) from a dense database of meteorological stations in the northernmost semi-arid region of Europe, the Ebro valley. The HG method requires the calculation of estimates of extraterrestrial radiation (Ra). We calculated this parameter using two approaches: (1) the common approach that assumes a planar surface and determines the parameter as a function of latitude and (2) using a digital terrain model (DTM) and GIS modelling. The maps were made on a monthly basis using both approaches. We also compared possible propagations of errors in the map calculations for maps derived from modelled layers of maximum and minimum temperatures with those modelled using previously determined local ETo calculations. We demonstrate that calculations of Ra from a DTM and GIS modelling provide a more realistic spatial distribution of ETo than those derived by only considering latitude. It is also preferable to model in advance the variables involved in the calculation of ETo (temperature and Ra) and to subsequently calculate ETo by means of layer algebra in the GIS rather than directly model the local ETo calculations. The obtained maps are useful for the purposes of agriculture and ecological and water resources management in the study area.This work has been supported by the project CGL2005-
04508/BOS financed by the Spanish Comission of Science
and Technology (CICYT) and FEDER, PIP176/2005
financed by the Aragón Government, and ‘Programa
de grupos de investigación consolidados’ (BOA 48 of
20-04-2005), also financed by the Aragón Government.
Research of the third author was supported by postdoctoral
fellowship by the Ministerio de Educación, Cultura
y Deporte (Spain).Peer reviewe
Fluctuations between high- and low-modularity topology in time-resolved functional connectivity
Modularity is an important topological attribute for functional brain
networks. Recent studies have reported that modularity of functional networks
varies not only across individuals being related to demographics and cognitive
performance, but also within individuals co-occurring with fluctuations in
network properties of functional connectivity, estimated over short time
intervals. However, characteristics of these time-resolved functional networks
during periods of high and low modularity have remained largely unexplored. In
this study we investigate spatiotemporal properties of time-resolved networks
in the high and low modularity periods during rest, with a particular focus on
their spatial connectivity patterns, temporal homogeneity and test-retest
reliability. We show that spatial connectivity patterns of time-resolved
networks in the high and low modularity periods are represented by increased
and decreased dissociation of the default mode network module from
task-positive network modules, respectively. We also find that the instances of
time-resolved functional connectivity sampled from within the high (low)
modularity period are relatively homogeneous (heterogeneous) over time,
indicating that during the low modularity period the default mode network
interacts with other networks in a variable manner. We confirmed that the
occurrence of the high and low modularity periods varies across individuals
with moderate inter-session test-retest reliability and that it is correlated
with previously-reported individual differences in the modularity of functional
connectivity estimated over longer timescales. Our findings illustrate how
time-resolved functional networks are spatiotemporally organized during periods
of high and low modularity, allowing one to trace individual differences in
long-timescale modularity to the variable occurrence of network configurations
at shorter timescales.Comment: Reorganized the paper; to appear in NeuroImage; arXiv abstract
shortened to fit within character limit
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Predicting visual function from the measurements of retinal nerve fiber layer structure
Purpose: To develop and validate a method for predicting visual function from retinal nerve fibre layer (RNFL) structure in glaucoma.
Methods: RNFL thickness (RNFLT) measurements from GDxVCC scanning laser polarimetry (SLP) and visual field (VF) sensitivity from standard automated perimetry were made available from 535 eyes from three centres. In a training dataset, structure-function relationships were characterized using linear regression and a type of neural network: Radial Basis Function customised under a Bayesian framework (BRBF). These two models were used in a test dataset to 1) predict sensitivity values at individual VF locations from RNFLT measurements and 2) predict the spatial relationship between VF locations and positions at a peripapillary RNFLT measurement annulus. Predicted spatial relationships were compared with a published anatomical structure-function map.
Results: Compared with linear regression, BRBF yielded a nearly two-fold improvement (P<0.001; paired t-test) in performance of predicting VF sensitivity in the test dataset (mean absolute prediction error of 2.9dB (standard deviation (SD) 3.7dB) versus 4.9dB (SD 4.0dB)). The predicted spatial structure-function relationship accorded better (P<0.001; paired t-test) with anatomical prior knowledge when the BRBF was compared with the linear regression (median absolute angular difference of 15° versus 62°).
Conclusions: The BRBF generates clinically useful relationships that relate topographical maps of RNFL measurement to VF locations and allows the VF sensitivity to be predicted from structural measurements. This method may allow clinicians to evaluate structural and functional measures in the same domain. It could also be generalized to use other structural measures
Constraining tropospheric mixing timescales using airborne observations and numerical models
International audienceA technique is demonstrated for estimating atmospheric mixing time-scales from in-situ data, using a Lagrangian model initialised from an Eulerian chemical transport model (CTM). This method is applied to airborne tropospheric CO observations taken during seven flights of the Mediterranean Intensive Oxidant Study (MINOS) campaign, of August 2001. The time-scales derived, correspond to mixing applied at the spatial scale of the CTM grid. Specifically, they are upper bound estimates of the mix-down lifetime that should be imposed for a Lagrangian model to reproduce the observed small-scale tracer structure. They are relevant to the family of hybrid Lagrangian-Eulerian models, which impose Eulerian grid mixing to an underlying Lagrangian model. The method uses the fact that in Lagrangian tracer transport modelling, the mixing spatial and temporal scales are decoupled: the spatial scale is determined by the resolution of the initial tracer field, and the time scale by the trajectory length. The chaotic nature of lower-atmospheric advection results in the continuous generation of smaller spatial scales, a process terminated in the real atmosphere by mixing. Thus, a mix-down lifetime can be estimated by varying trajectory length so that the model reproduces the observed amount of small-scale tracer structure. Selecting a trajectory length is equivalent to choosing a mixing timescale. For the cases studied, the results are very insensitive to CO photochemical change calculated along the trajectories. The method is most appropriate for relatively homogeneous regions, i.e. it is not too important to account for changes in aircraft altitude or the positioning of stratospheric intrusions, so that small scale structure is easily distinguished. The chosen flights showed a range of mix-down time upper limits: 1 and 3 days for 8 August and 3 August, due to recent convective and boundary layer mixing respectively, and 7?9 days for 16, 17, 22a, 22c and 24 August. For the flight of 3 August, the observed concentrations result from a complex set of transport histories, and the models are used to interpret the observed structure, while illustrating where more caution is required with this method of estimating mix-down lifetimes
Oxygenated compounds in aged biomass burning plumes over the Eastern Mediterranean: evidence for strong secondary production of methanol and acetone
International audienceAirborne measurements of acetone, methanol, PAN, acetonitrile (by Proton Transfer Reaction Mass Spectrometry), and CO (by Tunable Diode Laser Absorption Spectroscopy) have been performed during the Mediterranean Intensive Oxidants Study (MINOS August 2001). We have identified ten biomass burning plumes from strongly elevated acetonitrile mixing ratios. The characteristic biomass burning signatures obtained from these plumes reveal secondary production of acetone and methanol, while CO photochemically declines in the plumes. Mean excess mixing ratios - normalized to CO - of 1.8%, 0.20%, 3.8%, and 0.65% for acetone, acetonitrile, methanol, and PAN, respectively, were found. By scaling to an assumed global annual source of 663-807Tg CO, biomass burning emissions of 25-31 and 29-35 Tg/yr for acetone and methanol are estimated, respectively. Our measurements suggest that the present biomass burning contributions of acetone and methanol are significantly underestimated due to the neglect of secondary formation within the plume. Median acetonitrile mixing ratios throughout the troposphere were around 150pmol/mol, in accord with current biomass burning inventories and an atmospheric lifetime of ~6 months
Post-surgical complications in patients undergoing radical cystectomy according to the patient’s nutritional status
Introducción: La cistectomía radical es el tratamiento de elección para los tumores vesicales musculo-invasivos presentando una gran morbilidad y una considerable tasa de mortalidad. Un factor importante a tener en cuenta es el estado nutricional del paciente ya que puede impactar de forma negativa en la evolución clínica de los pacientes. Material y métodos: Realizamos un estudio retrospectivo de las cistectomías realizadas entre 2012 y 2015 en el servicio de Urología de HU Son Espases y se evalúa la aparición de complicaciones postoperatorias según el estado nutricional calórico calculado a través del IMC, el estado nutricional proteico calculado a través de la albúmina postoperatoria inmediata y el estado nutricional inmunológico a través de los linfocitos totales. Resultados: Presentaron alguna complicación el 42% de los pacientes. Un 21% presentaron únicamente una complicación Clavien II y un 21% presentaron una complicación mayor a Clavien III o más de una complicación. Se encontraron diferencias estadísticamente significativas según el estado nutricional proteico (Normal-leve vs moderado-grave) en la fuga de la anastomosis uretero-ileal. No se encontraron diferencias en el resto de variables. Conclusiones: La mayoría de pacientes sometidos a cistectomía radical con derivación urinaria tipo intestinal presentan algún estado de malnutrición proteica postoperatoria. En nuestra serie, el estado nutricional proteico del paciente presenta una relación con la aparición de fuga de la anastomosis uretero-ileal.Radical cystectomy is the election treatment for muscle-invasive bladder tumors presenting a high morbidity and significant mortality rate. An important factor to consider is the nutritional status of the patient because it can negatively impact the clinical course of patients. Methods: We perfomed a retrospective study of radical cystectomies with intestinal conduct between 2012 and 2015 in the department of Urology in HU Espases and we evaluated the postoperative complications according to the caloric nutritional status calculated by BMI, protein nutritional status calculated by the immediate postoperative albumin and the inmunological nutritional status by total account of lymphocites. Results: Developed complications the 42% of patients. 21% had only one complication Clavien II and 21% had one complication Clavien III or more than one complication. We found statistically significant differences with the protein nutritional status (mild Normal-vs moderate to severe) in the escape of the ureter-ileal anastomosis. No differences in the other variables were found. Conclusions: Most patients undergoing radical cystectomy with intestinal conduct type have a postoperative state of protein malnutrition. In our series, the protein nutritional status of the patient has a relationship with the occurrence of leakage from the ureter-ileal anastomosis
Contribution of common and rare variants to bipolar disorder susceptibility in extended pedigrees from population isolates.
Current evidence from case/control studies indicates that genetic risk for psychiatric disorders derives primarily from numerous common variants, each with a small phenotypic impact. The literature describing apparent segregation of bipolar disorder (BP) in numerous multigenerational pedigrees suggests that, in such families, large-effect inherited variants might play a greater role. To identify roles of rare and common variants on BP, we conducted genetic analyses in 26 Colombia and Costa Rica pedigrees ascertained for bipolar disorder 1 (BP1), the most severe and heritable form of BP. In these pedigrees, we performed microarray SNP genotyping of 838 individuals and high-coverage whole-genome sequencing of 449 individuals. We compared polygenic risk scores (PRS), estimated using the latest BP1 genome-wide association study (GWAS) summary statistics, between BP1 individuals and related controls. We also evaluated whether BP1 individuals had a higher burden of rare deleterious single-nucleotide variants (SNVs) and rare copy number variants (CNVs) in a set of genes related to BP1. We found that compared with unaffected relatives, BP1 individuals had higher PRS estimated from BP1 GWAS statistics (P = 0.001 ~ 0.007) and displayed modest increase in burdens of rare deleterious SNVs (P = 0.047) and rare CNVs (P = 0.002 ~ 0.033) in genes related to BP1. We did not observe rare variants segregating in the pedigrees. These results suggest that small-to-moderate effect rare and common variants are more likely to contribute to BP1 risk in these extended pedigrees than a few large-effect rare variants
On the fluid-fluid phase separation in charged-stabilized colloidal suspensions
We develop a thermodynamic description of particles held at a fixed surface
potential. This system is of particular interest in view of the continuing
controversy over the possibility of a fluid-fluid phase separation in aqueous
colloidal suspensions with monovalent counterions. The condition of fixed
surface potential allows in a natural way to account for the colloidal charge
renormalization. In a first approach, we assess the importance of the so called
``volume terms'', and find that in the absence of salt, charge renormalization
is sufficient to stabilize suspension against a fluid-fluid phase separation.
Presence of salt, on the other hand, is found to lead to an instability. A very
strong dependence on the approximations used, however, puts the reality of this
phase transition in a serious doubt. To further understand the nature of the
instability we next study a Jellium-like approximation, which does not lead to
a phase separation and produces a relatively accurate analytical equation of
state for a deionized suspensions of highly charged colloidal spheres. A
critical analysis of various theories of strongly asymmetric electrolytes is
presented to asses their reliability as compared to the Monte Carlo
simulations
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