1,863 research outputs found
Peristaltic Transport of a Rheological Fluid: Model for Movement of Food Bolus Through Esophagus
Fluid mechanical peristaltic transport through esophagus has been of concern
in the paper. A mathematical model has been developed with an aim to study the
peristaltic transport of a rheological fluid for arbitrary wave shapes and tube
lengths. The Ostwald-de Waele power law of viscous fluid is considered here to
depict the non-Newtonian behaviour of the fluid. The model is formulated and
analyzed with the specific aim of exploring some important information
concerning the movement of food bolus through the esophagus. The analysis has
been carried out by using lubrication theory. The study is particularly
suitable for cases where the Reynolds number is small. The esophagus is treated
as a circular tube through which the transport of food bolus takes places by
periodic contraction of the esophageal wall. Variation of different variables
concerned with the transport phenomena such as pressure, flow velocity,
particle trajectory and reflux are investigated for a single wave as well as
for a train of periodic peristaltic waves. Locally variable pressure is seen to
be highly sensitive to the flow index `n'. The study clearly shows that
continuous fluid transport for Newtonian/rheological fluids by wave train
propagation is much more effective than widely spaced single wave propagation
in the case of peristaltic movement of food bolus in the esophagus.Comment: Accepted for publication in Applied Mathematics and Mechanics (AMM),
Springe
Coupling Unification, GUT-Scale Baryogenesis and Neutron-Antineutron Oscillation in SO(10)
We show that unification of the three gauge couplings can be realized
consistently in a class of non-supersymmetric SO(10) models with a one-step
breaking to the Standard Model if a color-sextet scalar field survives down to
the TeV scale. Such scalars, which should be accessible to the LHC for direct
detection, arise naturally in SO(10) as remnants of the seesaw mechanism for
neutrino masses. The diquark couplings of these scalars lead to \Delta B = 2
baryon number violating processes such as neutron-antineutron oscillation. We
estimate the free neutron-antineutron transition time to be \tau_{n-\bar{n}}
\approx (10^9-10^{12}) sec., which is in the interesting range for next
generation n-\bar{n} oscillation experiments. These models also realize
naturally the recently proposed (B-L)-violating GUT scale baryogenesis which
survives to low temperatures unaffected by the electroweak sphaleron
interactions.Comment: 15 pages, 4 eps figures, references added, to appear in Phys. Lett.
Highway Entrance Ramp Monitoring and Control using Soft Computing Techniques
Highway entrance ramp monitoring and control is used to regularize the flow of traffic entering through the highway entrance ramps. It detects the flow of traffic enter ing through the highway ramp monitoring system and controls the flow of traffic using ramp monitoring and control algorithm. This algorithm employs some soft computing techniques which is a suitable choice due to the imprecise information and the level of inaccuracy in the monitoring data available. The use of AI - based search algorithms to calibrate the parameters of a micro - simulation model or estimate the dynamic demand needed to run the model is an area that has received significant attention from researchers recently. Use of soft computing techniques improves the traffic flow as also increases the efficiency of the traffic system with enhanced control a nd safety
Modeling the effects of insecticides and external efforts on crop production
In this paper a nonlinear mathematical model is proposed and analyzed to understand the effects of insects, insecticides and external efforts on the agricultural crop productions. In the modeling process, we have assumed that crops grow logistically and decrease due to insects, which are wholly dependent on crops. Insecticides and external efforts are applied to control the insect population and enhance the crop production, respectively. The external efforts affect the intrinsic growth rate and carrying capacity of crop production. The feasibility of equilibria and their stability properties are discussed. We have identified the key parameters for the formulation of effective control strategies necessary to combat the insect population and increase the crop production using the approach of global sensitivity analysis. Numerical simulation is performed, which supports the analytical findings. It is shown that periodic oscillations arise through Hopf bifurcation as spraying rate of insecticides decreases. Our findings suggest that to gain the desired crop production, the rate of spraying and the quality of insecticides with proper use of external efforts are much important
Ranking ligand affinity for the DNA minor groove by experiment and simulation
The structural and thermodynamic basis for the strength and selectivity of the interactions of minor-groove binders (MGBs) with DNA is not fully understood. In 2003 we reported the first example of a thiazole containing MGB that bound in a phase shifted pattern that spanned 6 base-pairs rather than the usual 4 (for tricyclic distamycin-like compounds). Since then, using DNA footprinting, nuclear magnetic resonance spectroscopy, isothermal titration calorimetry and molecular dynamics, we have established that the flanking bases around the central 4 being read by the ligand have subtle effects on recognition. We have investigated the effect of these flanking sequences on binding and the reasons for the differences and established a computational method to rank ligand affinity against varying DNA sequences
Sociodemographic Correlates of Tobacco Consumption in Rural Gujarat, India
Background. The purpose of this study was to examine occupation-, education-, and gender-specific patterns of tobacco use and knowledge of its health effects among 23,953 rural Asian Indians ≥18 years in Gujarat. Methodology. A statewide, community-based, cross-sectional survey was conducted in 26 districts of Gujarat (December 2010–May 2015), using face-to-face interviews by trained community health workers called SEVAKS. Results. Mean age was 39.8 ± 15.2 years. Eighteen percent of respondents used tobacco in various forms. Tobacco consumption was significantly higher among males (32%), 18–34 years’ age group (35%), those who were self-employed (72%), and those with elementary education (40%). The prevalence was 11 times higher among males than females (95% CI = 9.78, 13.13). Adjusted ORs for tobacco use showed strong gradient by age and educational level; consumption was lower among the illiterates and higher for older participants (≥55 years). Tobacco consumption also varied by occupation; that is, those who were self-employed and employed for wages were more likely to use tobacco than those who were unemployed. Knowledge of health effects of tobacco lowered the odds of consumption by 30–40%. Conclusions. Effective educational programs should be tailored by gender, to improve knowledge of health risks and dispel myths on perceived benefits of tobacco
Large introns in relation to alternative splicing and gene evolution: a case study of Drosophila bruno-3
Background:
Alternative splicing (AS) of maturing mRNA can generate structurally and functionally distinct transcripts from the same gene. Recent bioinformatic analyses of available genome databases inferred a positive correlation between intron length and AS. To study the interplay between intron length and AS empirically and in more detail, we analyzed the diversity of alternatively spliced transcripts (ASTs) in the Drosophila RNA-binding Bruno-3 (Bru-3) gene. This gene was known to encode thirteen exons separated by introns of diverse sizes, ranging from 71 to 41,973 nucleotides in D. melanogaster. Although Bru-3's structure is expected to be conducive to AS, only two ASTs of this gene were previously described.
Results:
Cloning of RT-PCR products of the entire ORF from four species representing three diverged Drosophila lineages provided an evolutionary perspective, high sensitivity, and long-range contiguity of splice choices currently unattainable by high-throughput methods. Consequently, we identified three new exons, a new exon fragment and thirty-three previously unknown ASTs of Bru-3. All exon-skipping events in the gene were mapped to the exons surrounded by introns of at least 800 nucleotides, whereas exons split by introns of less than 250 nucleotides were always spliced contiguously in mRNA. Cases of exon loss and creation during Bru-3 evolution in Drosophila were also localized within large introns. Notably, we identified a true de novo exon gain: exon 8 was created along the lineage of the obscura group from intronic sequence between cryptic splice sites conserved among all Drosophila species surveyed. Exon 8 was included in mature mRNA by the species representing all the major branches of the obscura group. To our knowledge, the origin of exon 8 is the first documented case of exonization of intronic sequence outside vertebrates.
Conclusion:
We found that large introns can promote AS via exon-skipping and exon turnover during evolution likely due to frequent errors in their removal from maturing mRNA. Large introns could be a reservoir of genetic diversity, because they have a greater number of mutable sites than short introns. Taken together, gene structure can constrain and/or promote gene evolution
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