Conformational studies of various hemoglobins by natural-abundance 13C NMR spectroscopy

Studies of variously liganded hemoglobins (both from human and rabbit) by natural-abundance 13C NMR spectroscopy have revealed apparent conformational differences that have been interpreted on the basis of two quaternary structures for the α2ß2 tetramer, and variable tertiary structures for the individual α and ß subunits. In solution, rabbit hemoglobins appear to have somewhat more flexibility than human hemoglobins

Meta learning of bounds on the Bayes classifier error

Meta learning uses information from base learners (e.g. classifiers or estimators) as well as information about the learning problem to improve upon the performance of a single base learner. For example, the Bayes error rate of a given feature space, if known, can be used to aid in choosing a classifier, as well as in feature selection and model selection for the base classifiers and the meta classifier. Recent work in the field of f-divergence functional estimation has led to the development of simple and rapidly converging estimators that can be used to estimate various bounds on the Bayes error. We estimate multiple bounds on the Bayes error using an estimator that applies meta learning to slowly converging plug-in estimators to obtain the parametric convergence rate. We compare the estimated bounds empirically on simulated data and then estimate the tighter bounds on features extracted from an image patch analysis of sunspot continuum and magnetogram images.Comment: 6 pages, 3 figures, to appear in proceedings of 2015 IEEE Signal Processing and SP Education Worksho

Standing on the Shoulders of Giants: The Cleft Palate-Craniofacial Journal (1964-1989)Electronic Archive

Current research and clinical practice in cleft palate and craniofacial disorders “stands on the shoulders of giants” who came before us. To enable thirty years of seminal research articles to become digitally available to a worldwide community of students, scholars, and clinicians, a collaboration was forged in 2004 between University of Pittsburgh’s Digital Research Library (DRL) and ACPA, (with the agreement of Allen Press), to create an electronic archive of the first thirty years of the Cleft Palate Craniofacial Journal . The work was performed pro bono, by all parties

Design, development and performance study of six-gap glass MRPC detectors

The Multigap Resistive Plate Chambers (MRPCs) are gas ionization detectors with multiple gas sub-gaps made of resistive electrodes. The high voltage (HV) is applied on the outer surfaces of outermost resistive plates only, while the interior plates are left electrically floating. The presence of multiple narrow sub--gaps with high electric field results in faster signals on the outer electrodes, thus improving the detector's time resolution. Due to their excellent performance and relatively low cost, the MRPC detector has found potential application in Time-of-Flight (TOF) systems. Here we present the design, fabrication, optimization of the operating parameters such as the HV, the gas mixture composition, and, performance of six--gap glass MRPC detectors of area 27cm $\times$ 27 cm, which are developed in order to find application as trigger detectors, in TOF measurement etc. The design has been optimized with unique spacers and blockers to ensure a proper gas flow through the narrow sub-gaps, which are 250 $\mu$m wide. The gas mixture consisting of R134A, Isobutane and SF$_{6}$, and the fraction of each constituting gases has been optimized after studying the MRPC performance for a set of different concentrations. The counting efficiency of the MRPC is about 95% at $17.9$ kV. At the same operating voltage, the time resolution, after correcting for the walk effect, is found to be about $219$ ps.Comment: Revised version with 15 pages, 14 figures, 2 tables. Accepted for publication in the European Physical Journal

Quantum Hall Ferromagnets: Induced Topological term and electromagnetic interactions

The $\nu = 1$ quantum Hall ground state in materials like GaAs is well known to be ferromagnetic in nature. The exchange part of the Coulomb interaction provides the necessary attractive force to align the electron spins spontaneously. The gapless Goldstone modes are the angular deviations of the magnetisation vector from its fixed ground state orientation. Furthermore, the system is known to support electrically charged spin skyrmion configurations. It has been claimed in the literature that these skyrmions are fermionic owing to an induced topological Hopf term in the effective action governing the Goldstone modes. However, objections have been raised against the method by which this term has been obtained from the microscopics of the system. In this article, we use the technique of the derivative expansion to derive, in an unambiguous manner, the effective action of the angular degrees of freedom, including the Hopf term. Furthermore, we have coupled perturbative electromagnetic fields to the microscopic fermionic system in order to study their effect on the spin excitations. We have obtained an elegant expression for the electromagnetic coupling of the angular variables describing these spin excitations.Comment: 23 pages, Plain TeX, no figure

Consumer Willingness-to-Pay for Fresh Pork Attributes

A survey was used to gauge consumer preferences toward four fresh pork attributes: juiciness, tenderness, marbling, and leanness. The survey elicited consumer willingness-to-pay a premium for an improvement in these attributes. Approximately one-half of the respondents were willing to pay some premium for the attributes of juiciness, leanness, and tenderness. The average premium size ranged from $0.20/lb. for marbling to$0.37/lb. for tenderness. Neither the choice of a certifying agency nor the use of a cheap talk script influenced premium levels.pork attributes, pork markets, willingness to pay, Agribusiness, Marketing,

Information Theoretic Structure Learning with Confidence

Information theoretic measures (e.g. the Kullback Liebler divergence and Shannon mutual information) have been used for exploring possibly nonlinear multivariate dependencies in high dimension. If these dependencies are assumed to follow a Markov factor graph model, this exploration process is called structure discovery. For discrete-valued samples, estimates of the information divergence over the parametric class of multinomial models lead to structure discovery methods whose mean squared error achieves parametric convergence rates as the sample size grows. However, a naive application of this method to continuous nonparametric multivariate models converges much more slowly. In this paper we introduce a new method for nonparametric structure discovery that uses weighted ensemble divergence estimators that achieve parametric convergence rates and obey an asymptotic central limit theorem that facilitates hypothesis testing and other types of statistical validation.Comment: 10 pages, 3 figure

The intrinsic value of HFO features as a biomarker of epileptic activity

High frequency oscillations (HFOs) are a promising biomarker of epileptic brain tissue and activity. HFOs additionally serve as a prototypical example of challenges in the analysis of discrete events in high-temporal resolution, intracranial EEG data. Two primary challenges are 1) dimensionality reduction, and 2) assessing feasibility of classification. Dimensionality reduction assumes that the data lie on a manifold with dimension less than that of the feature space. However, previous HFO analyses have assumed a linear manifold, global across time, space (i.e. recording electrode/channel), and individual patients. Instead, we assess both a) whether linear methods are appropriate and b) the consistency of the manifold across time, space, and patients. We also estimate bounds on the Bayes classification error to quantify the distinction between two classes of HFOs (those occurring during seizures and those occurring due to other processes). This analysis provides the foundation for future clinical use of HFO features and buides the analysis for other discrete events, such as individual action potentials or multi-unit activity.Comment: 5 pages, 5 figure