Enhanced many-body effects in the excitation spectrum of a weakly-interacting rotating Bose-Einstein condensate

The excitation spectrum of a highly-condensed two-dimensional trapped Bose-Einstein condensate (BEC) is investigated within the rotating frame of reference. The rotation is used to transfer high-lying excited states to the low-energy spectrum of the BEC. We employ many-body linear-response theory and show that, once the rotation leads to a quantized vortex in the ground state, already the low-energy part of the excitation spectrum shows substantial many-body effects beyond the realm of mean-field theory. We demonstrate numerically that the many-body effects grow with the vorticity of the ground state, meaning that the rotation enhances them even for very weak repulsion. Furthermore, we explore the impact of the number of bosons $N$ in the condensate on a low-lying single-particle excitation, which is describable within mean-field theory. Our analysis shows deviations between the many-body and mean-field results which clearly persist when $N$ is increased up to the experimentally relevant regime, typically ranging from several thousand up to a million bosons in size. Implications are briefly discussed

Accurate prediction of gene feedback circuit behavior from component properties

A basic assumption underlying synthetic biology is that analysis of genetic circuit elements, such as regulatory proteins and promoters, can be used to understand and predict the behavior of circuits containing those elements. To test this assumption, we used time‐lapse fluorescence microscopy to quantitatively analyze two autoregulatory negative feedback circuits. By measuring the gene regulation functions of the corresponding repressor–promoter interactions, we accurately predicted the expression level of the autoregulatory feedback loops, in molecular units. This demonstration that quantitative characterization of regulatory elements can predict the behavior of genetic circuits supports a fundamental requirement of synthetic biology

Zoo of quantum phases and excitations of cold bosonic atoms in optical lattices

Quantum phases and phase transitions of weakly- to strongly-interacting bosonic atoms in deep to shallow optical lattices are described by a {\it single multi-orbital mean-field approach in real space}. For weakly-interacting bosons in 1D, the critical value of the superfluid to Mott insulator (MI) transition found is in excellent agreement with {\it many-body} treatments of the Bose-Hubbard model. For strongly-interacting bosons, (i) additional MI phases appear, for which two (or more) atoms residing in {\it each site} undergo a Tonks-Girardeau-like transition and localize and (ii) on-site excitation becomes the excitation lowest in energy. Experimental implications are discussed.Comment: 12 pages, 3 figure

L-selectin mediated leukocyte tethering in shear flow is controlled by multiple contacts and cytoskeletal anchorage facilitating fast rebinding events

L-selectin mediated tethers result in leukocyte rolling only above a threshold in shear. Here we present biophysical modeling based on recently published data from flow chamber experiments (Dwir et al., J. Cell Biol. 163: 649-659, 2003) which supports the interpretation that L-selectin mediated tethers below the shear threshold correspond to single L-selectin carbohydrate bonds dissociating on the time scale of milliseconds, whereas L-selectin mediated tethers above the shear threshold are stabilized by multiple bonds and fast rebinding of broken bonds, resulting in tether lifetimes on the timescale of $10^{-1}$ seconds. Our calculations for cluster dissociation suggest that the single molecule rebinding rate is of the order of $10^4$ Hz. A similar estimate results if increased tether dissociation for tail-truncated L-selectin mutants above the shear threshold is modeled as diffusive escape of single receptors from the rebinding region due to increased mobility. Using computer simulations, we show that our model yields first order dissociation kinetics and exponential dependence of tether dissociation rates on shear stress. Our results suggest that multiple contacts, cytoskeletal anchorage of L-selectin and local rebinding of ligand play important roles in L-selectin tether stabilization and progression of tethers into persistent rolling on endothelial surfaces.Comment: 9 pages, Revtex, 4 Postscript figures include

Time-dependent multi-orbital mean-field for fragmented Bose-Einstein condensates

The evolution of Bose-Einstein condensates is usually described by the famous time-dependent Gross-Pitaevskii equation, which assumes all bosons to reside in a single time-dependent orbital. In the present work we address the evolution of fragmented condensates, for which two (or more) orbitals are occupied, and derive a corresponding time-dependent multi-orbital mean-field theory. We call our theory TDMF($n$), where $n$ stands for the number of evolving fragments. Working equations for a general two-body interaction between the bosons are explicitly presented along with an illustrative numerical example.Comment: 16 pages, 1 figur

Build-up of coherence between initially-independent subsystems: The case of Bose-Einstein condensates

When initially-independent subsystems are made to contact, {\it coherence} can develop due to interaction between them. We exemplify and demonstrate this paradigm through several scenarios of two initially-independent Bose-Einstein condensates which are allowed to collide. The build-up of coherence depends strongly on time, interaction strength and other parameters of each condensate. Implications are discussed.Comment: 11 pages, 3 figure

Accurate multi-boson long-time dynamics in triple-well periodic traps

To solve the many-boson Schr\"odinger equation we utilize the Multiconfigurational time-dependent Hartree method for bosons (MCTDHB). To be able to attack larger systems and/or to propagate the solution for longer times, we implement a parallel version of the MCTDHB method thereby realizing the recently proposed [Streltsov {\it et al.} arXiv:0910.2577v1] novel idea how to construct efficiently the result of the action of the Hamiltonian on a bosonic state vector. We study the real-space dynamics of repulsive bosonic systems made of N=12, 51 and 3003 bosons in triple-well periodic potentials. The ground state of this system is three-fold fragmented. By suddenly strongly distorting the trap potential, the system performs complex many-body quantum dynamics. At long times it reveals a tendency to an oscillatory behavior around a threefold fragmented state. These oscillations are strongly suppressed and damped by quantum depletions. In spite of the richness of the observed dynamics, the three time-adaptive orbitals of MCTDHB(M=3) are capable to describe the many-boson quantum dynamics of the system for short and intermediate times. For longer times, however, more self-consistent time-adaptive orbitals are needed to correctly describe the non-equilibrium many-body physics. The convergence of the MCTDHB($M$) method with the number $M$ of self-consistent time-dependent orbitals used is demonstrated.Comment: 37 pages, 7 figure

Formation of dynamical Schr\"odinger cats in low-dimensional ultracold attractive Bose gases

Dynamical Schr\"odinger cats can be formed when a one-dimensional attractive Bose-gas cloud is scattered off a potential barrier. Once formed, these objects are stable in time. The phenomenon and its mechanism -- transformation of kinetic energy to internal energy of the scattered atomic cloud -- are obtained by solving the time-dependent many-boson Schr\"odinger equation. Implications are discussed.Comment: 11 pages, 3 figure