The cystic fibrosis microbiome in an ecological perspective and its impact in antibiotic therapy

The recent focus on the cystic fibrosis (CF) complex microbiome has led to the recognition that the microbes can interact between them and with the host immune system, affecting the disease progression and treatment routes. Although the main focus remains on the interactions between traditional pathogens, growing evidence supports the contribution and the role of emergent species. Understanding the mechanisms and the biological effects involved in polymicrobial interactions may be the key to improve effective therapies and also to define new strategies for disease control. This review focuses on the interactions between microbe-microbe and host-microbe, from an ecological point of view, discussing their impact on CF disease progression. There are increasing indications that these interactions impact the success of antimicrobial therapy. Consequently, a new approach where therapy is personalized to patients by taking into account their individual CF microbiome is suggested.Portuguese Foundation for Science and Technology (FCT), the strategic funding of UID/BIO/04469/2013-CEB and UID/EQU/00511/2013-LEPABE units. This study was also supported by FCT and the European Community fund FEDER, through Program COMPETE, under the scope of the Projects “DNA mimics” PIC/IC/82815/2007, RECI/BBB-EBI/0179/2012 (FCOMP-01-0124-FEDER-027462), “BioHealth—Biotechnology and Bioengineering approaches to improve health quality”, Ref. NORTE-07-0124-FEDER-000027 and NORTE-07-0124-FEDER-000025—RL2_ Environment and Health, co-funded by the Programa Operacional Regional do Norte (ON.2 – O Novo Norte), QREN, FEDER. The authors also acknowledge the grant of Susana P. Lopes (SFRH/BPD/95616/2013) and of the COST-Action TD1004: Theragnostics for imaging and therapy

Non-intrusive polynomial chaos method applied to full-order and reduced problems in computational fluid dynamics: A comparison and perspectives

In this work, Uncertainty Quantification (UQ) based on non-intrusive Polynomial Chaos Expansion (PCE) is applied to the CFD problem of the flow past an airfoil with parameterized angle of attack and inflow velocity. To limit the computational cost associated with each of the simulations required by the non-intrusive UQ algorithm used, we resort to a Reduced Order Model (ROM) based on Proper Orthogonal Decomposition (POD)-Galerkin approach. A first set of results is presented to characterize the accuracy of the POD-Galerkin ROM developed approach with respect to the Full Order Model (FOM) solver (OpenFOAM). A further analysis is then presented to assess how the UQ results are affected by substituting the FOM predictions with the surrogate ROM ones

A generalised porous medium approach to study thermo-fluid dynamics in human eyes

The present work describes the application of the generalised porous medium model to study heat and fluid flow in healthy and glaucomatous eyes of different subject specimens, considering the presence of ocular cavities and porous tissues. The 2D computational model, implemented into the open-source software OpenFOAM, has been verified against benchmark data for mixed convection in domains partially filled with a porous medium. The verified model has been employed to simulate the thermo-fluid dynamic phenomena occurring in the anterior section of four patient-specific human eyes, considering the presence of anterior chamber (AC), trabecular meshwork (TM), Schlemm’s canal (SC), and collector channels (CC). The computational domains of the eye are extracted from tomographic images. The dependence of TM porosity and permeability on intraocular pressure (IOP) has been analysed in detail, and the differences between healthy and glaucomatous eye conditions have been highlighted, proving that the different physiological conditions of patients have a significant influence on the thermo-fluid dynamic phenomena. The influence of different eye positions (supine and standing) on thermo-fluid dynamic variables has been also investigated: results are presented in terms of velocity, pressure, temperature, friction coefficient and local Nusselt number. The results clearly indicate that porosity and permeability of TM are two important parameters that affect eye pressure distribution

An experimental investigation of thermo-physical properties and heat transfer performance of Al(2)O(3)-Aviation Turbine Fuel nanofluids

Aviation Turbine Fuel (ATF)-Al(2)O(3) nanofluids are investigated for better heat transfer performance in a potential application of regeneratively cooled semi-cryogenic rocket engine thrust chambers. The volume concentration of Al(2)O(3) nanoparticles is varied between 0 and 1%. To ensure a realistic evaluation, all properties of the nanofluids are experimentally measured rather than resorting to available formulae or empirical correlations. Among the thermo-physical properties, thermal conductivity and specific heat are measured separately using experimental set-ups fabricated in-house whereas the viscosity is determined using a commercial viscometer. The heat transfer coefficient is determined using a horizontal double tube counter-flow heat exchanger under turbulent flow conditions. At 1% particle volume concentration, the enhancement in the thermal conductivity is 40%, whereas the viscosity increases by 38%. The measured specific heats of the nanofluids do not exhibit appreciable difference within the range of the particle volume concentrations investigated. The heat transfer coefficient increases by 30% at 1% particle volume concentration and correspondingly leads to an enhancement of 10% in the Nusselt number. For the same value of pressure drop, the heat transfer performances of nanofluids are compared with those of ATF. The experimental results show that the maximum enhancement in the heat transfer coefficient observed for the same pressure drop is 28% and even the least enhancement obtained is 2%. (C) 2011 Elsevier Ltd. All rights reserved

Mix design and production of flyash based geopolymer concrete

Geopolymer is a new development in the world of concrete in which cement is totally replaced by pozzolanic materials like fly ash and activated by highly alkaline solutions to act as a binder in the concrete mix. For the selection of suitable ingredients of geopolymer concrete to achieve desire strength at required workability, an experimental investigation has been carried out for the gradation of geopolymer concrete and a mix design procedure is proposed on the basis of quantity and fineness of fly ash, quantity of water, grading of fine aggregate, fine to total aggregate ratio. Sodium silicate solution with Na2O = 16.37 %, SiO2 = 34.35 % and H2O = 49.28 % and sodium hydroxide solution having 13 M concentration were maintained constant throughout the experiment. Water-to-geopolymer binder ratio of 0.35, alkaline solution-to-fly ash ratio of 0.35 and sodium silicate-to-sodium hydroxide ratio of 1.0 by mass were fixed on the basis of workability and cube compressive strength. Workability of geopolymer concrete was measured by flow table apparatus and cubes of 150 mm side were cast and tested for compressive strength after specified period of oven heating. The temperature of oven heating was maintained at 60 °C for 24 h duration and tested 7 days after heating. It is observed that the results of workability and compressive strength are well match with the required degree of workability and compressive strength. So, proposed method is used to design normal and standard geopolymer concrete