The concept of the sexual reproduction cycle and its evolutionary significance

The concept of a sexual reproduction cycle (SRC) was first proposed by Bai and Xu in 2013 to describe the integration of meiosis, sex differentiation and fertilization. This review discusses the evolutionary and scientific implications of considering these three events as part of a single process. Viewed in this way, the SRC is revealed to be a mechanism for efficiently increasing genetic variation, facilitating adaptation to environmental challenges. It also becomes clear that, in terms of cell proliferation, it is appropriate to contrast mitosis with the entire SRC, rather than with meiosis alone. Evolutionarily, it appears that the SRC was first established in unicellular eukaryotes and that all multicellular organisms evolved within that framework. This concept provides a new perspective into how sexual reproduction evolved, how generations should be defined and how developmental processes of various multicellular organisms should properly be compared

Quantum Hall Effects in a Non-Abelian Honeycomb Lattice

We study the tunable quantum Hall effects in a non-Abelian honeycomb optical lattice which is a many-Dirac-points system. We find that the quantum Hall effects present different features as change as relative strengths of several perturbations. Namely, a gauge-field-dressed next-nearest-neighbor hopping can induce the quantum spin Hall effect and a Zeeman field can induce a so-called quantum anomalous valley Hall effect which includes two copies of quantum Hall states with opposite Chern numbers and counter-propagating edge states. Our study extends the borders of the field of quantum Hall effects in honeycomb optical lattice when the internal valley degrees of freedom enlarge.Comment: 7 pages, 6 figure

Photoluminescence pressure coefficients of InAs/GaAs quantum dots

We have investigated the band-gap pressure coefficients of self-assembled InAs/GaAs quantum dots by calculating 17 systems with different quantum dot shape, size, and alloying profile using atomistic empirical pseudopotential method within the ``strained linear combination of bulk bands'' approach. Our results confirm the experimentally observed significant reductions of the band gap pressure coefficients from the bulk values. We show that the nonlinear pressure coefficients of the bulk InAs and GaAs are responsible for these reductions. We also find a rough universal pressure coefficient versus band gap relationship which agrees quantitatively with the experimental results. We find linear relationships between the percentage of electron wavefunction on the GaAs and the quantum dot band gaps and pressure coefficients. These linear relationships can be used to get the information of the electron wavefunctions.Comment: 8 pages, 2 tables, 4 figure

Noiseless method for checking the Peres separability criterion by local operations and classical communication

We present a method for checking Peres separability criterion in an arbitrary bipartite quantum state $\rho_{AB}$ within local operations and classical communication scenario. The method does not require the prior state reconstruction and the structural physical approximation. The main task for the two observers, Alice and Bob, is to estimate some specific functions. After getting these functions, they can determine the minimal eigenvalue of $\rho^{T_{B}}_{AB}$, which serves as an entanglement indicator in lower dimensions.Comment: 10 pages, 2 figure

Detecting a set of entanglement measures in an unknown tripartite quantum state by local operations and classical communication

We propose a more general method for detecting a set of entanglement measures, i.e. negativities, in an \emph{arbitrary} tripartite quantum state by local operations and classical communication. To accomplish the detection task using this method, three observers, Alice, Bob and Charlie, do not need to perform the partial transposition maps by the structural physical approximation; instead, they are only required to collectively measure some functions via three local networks supplemented by a classical communication. With these functions, they are able to determine the set of negativities related to the tripartite quantum state.Comment: 16 pages, 2 figures, revte

Identification and molecular characterization of tissue-preferred rice genes and their upstream regularly sequences on a genome-wide level

BACKGROUND: Gene upstream regularly sequences (URSs) can be used as one of the tools to annotate the biological functions of corresponding genes. In addition, tissue-preferred URSs are frequently used to drive the transgene expression exclusively in targeted tissues during plant transgenesis. Although many rice URSs have been molecularly characterized, it is still necessary and valuable to identify URSs that will benefit plant transformation and aid in analyzing gene function. RESULTS: In this study, we identified and characterized root-, seed-, leaf-, and panicle-preferred genes on a genome-wide level in rice. Subsequently, their expression patterns were confirmed through quantitative real-time RT-PCR (qRT-PCR) by randomly selecting 9candidate tissue-preferred genes. In addition, 5 tissue-preferred URSs were characterized by investigating the URS::GUS transgenic plants. Of these URS::GUS analyses, the transgenic plants harboring LOC_Os03g11350 URS::GUS construct showed the GUS activity only in young pollen. In contrast, when LOC_Os10g22450 URS was used to drive the reporter GUS gene, the GUS activity was detected only in mature pollen. Interestingly, the LOC_Os10g34360 URS was found to be vascular bundle preferred and its activities were restricted only to vascular bundles of leaves, roots and florets. In addition, we have also identified two URSs from genes LOC_Os02G15090 and LOC_Os06g31070 expressed in a seed-preferred manner showing the highest expression levels of GUS activities in mature seeds. CONCLUSION: By genome-wide analysis, we have identified tissue-preferred URSs, five of which were further characterized using transgenic plants harboring URS::GUS constructs. These data might provide some evidence for possible functions of the genes and be a valuable resource for tissue-preferred candidate URSs for plant transgenesis. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12870-014-0331-2) contains supplementary material, which is available to authorized users