Unexamined Assumptions: A Conversation between Arabella Stanger and Simon Ellis

A Conversation between Arabella Stanger and Simon Ellis regarding student screendance projects at Roehampton University

Quantificação não destrutiva do contéudo de clorofilas em folhas de milho através de método colorimétrico.

Este trabalho foi conduzido visando avaliar a viabilidade da utilização de um colorímetro, como alternativa ao medidor de clorofila para a quantificação não destrutiva de clorofilas em folhas de milho.Suplemento. Trabalho apresentado no 52. Congresso Brasileiro de Olericultura, Salvador, 2012

The BID Domain of Type IV Secretion Substrates Forms a Conserved Four-Helix Bundle Topped with a Hook

The BID (Bep intracellular delivery) domain functions as secretion signal in a subfamily of protein substrates of bacterial type IV secretion (T4S) systems. It mediates transfer of (1) relaxases and the attached DNA during bacterial conjugation, and (2) numerous Bartonella effector proteins (Beps) during protein transfer into host cells infected by pathogenic Bartonella species. Furthermore, BID domains of Beps have often evolved secondary effector functions within host cells. Here, we provide crystal structures for three representative BID domains and describe a novel conserved fold characterized by a compact, antiparallel four-helix bundle topped with a hook. The conserved hydrophobic core provides a rigid scaffold to a surface that, despite a few conserved exposed residues and similarities in charge distribution, displays significant variability. We propose that the genuine function of BID domains as T4S signal may primarily depend on their rigid structure, while the plasticity of their surface may facilitate adaptation to secondary effector functions

Mid-infrared colour gradients and the colour-magnitude relation in Virgo early-type galaxies

We make use of Spitzer imaging between 4 and 16 micron and near-infrared data at 2.2 micron to investigate the nature and distribution of the mid-infrared emission in a sample of early-type galaxies in the Virgo cluster. These data allow us to conclude, with some confidence, that the emission at 16 micron in passive ETGs is stellar in origin, consistent with previous work concluding that the excess mid-infrared emission comes from the dusty envelopes around evolved AGB stars. There is little evidence for the mid-infrared emission of an unresolved central component, as might arise in the presence of a dusty torus associated with a low-luminosity AGN. We nonetheless find that the 16 micron emission is more centrally peaked than the near-infrared emission, implying a radial stellar population gradient. By comparing with independent evidence from studies at optical wavelengths, we conclude that a metallicity that falls with increasing radius is the principal driver of the observed gradient. We also plot the mid-infrared colour-magnitude diagram and combine with similar work on the Coma cluster to define the colour-magnitude relation for absolute K-band magnitudes from -26 to -19. Because a correlation between mass and age would produce a relation with a gradient in the opposite sense to that observed, we conclude that the relation reflects the fact that passive ETGs of lower mass also have a lower average metallicity. The colour-magnitude relation is thus driven by metallicity effects. In contrast to what is found in Coma, we do not find any objects with anomalously bright 16 micron emission relative to the colour-magnitude relation. Although there is little overlap in the mass ranges probed in the two clusters, this may suggest that observable ``rejuvenation'' episodes are limited to intermediate mass objects.Comment: 8 pages, 4 figure

Upholding a role for EMT in pancreatic cancer metastasis

Epithelial-to-mesenchymal transition (EMT) is a cellular program that operates in the context of embryogenesis, wound healing and carcinoma pathogenesis to drive epithelial cells towards a mesenchymal state. During carcinoma progression, EMT enables the cells forming these tumours to acquire the traits of highly malignant cells, notably motility, invasiveness and an ability to disseminate to form distant metastases. Indeed, a number of published reports have associated EMT with a variety of malignant carcinoma cells. Recently, however, Zheng et al.1 reported that in genetically engineered mouse models of pancreatic adenocarcinoma development, carcinoma cells could metastasize without activating EMT programs. Their conclusions, if sustained by the evidence presented, would prompt a major change in how we conceptualize malignant progression and metastasis of carcinoma cells, including the neoplastic cells in human carcinomas

A detector module with highly efficient surface-alpha event rejection operated in CRESST-II Phase 2

The cryogenic dark matter experiment CRESST-II aims at the direct detection of WIMPs via elastic scattering off nuclei in scintillating CaWO$_4$ crystals. We present a new, highly improved, detector design installed in the current run of CRESST-II Phase 2 with an efficient active rejection of surface-alpha backgrounds. Using CaWO$_4$ sticks instead of metal clamps to hold the target crystal, a detector housing with fully-scintillating inner surface could be realized. The presented detector (TUM40) provides an excellent threshold of ${\sim}\,0.60\,$keV and a resolution of $\sigma\,{\approx}\,0.090$ keV (at 2.60$\,$keV). With significantly reduced background levels, TUM40 sets stringent limits on the spin-independent WIMP-nucleon scattering cross section and probes a new region of parameter space for WIMP masses below 3$\,$GeV/c$^2$. In this paper, we discuss the novel detector design and the surface-alpha event rejection in detail.Comment: 9 pages, 6 figure

X-ray Isophotes in a Rapidly Rotating Elliptical Galaxy: Evidence of Inflowing Gas

We describe two-dimensional gasdynamical computations of the X-ray emitting gas in the rotating elliptical galaxy NGC 4649 that indicate an inflow of about one solar mass per year at every radius. Such a large instantaneous inflow cannot have persisted over a Hubble time. The central constant-entropy temperature peak recently observed in the innermost 150 parsecs is explained by compressive heating as gas flows toward the central massive black hole. Since the cooling time of this gas is only a few million years, NGC 4649 provides the most acutely concentrated known example of the cooling flow problem in which the time-integrated apparent mass that has flowed into the galactic core exceeds the total mass observed there. This paradox can be resolved by intermittent outflows of energy or mass driven by accretion energy released near the black hole. Inflowing gas is also required at intermediate kpc radii to explain the ellipticity of X-ray isophotes due to spin-up by mass ejected by stars that rotate with the galaxy and to explain local density and temperature profiles. We provide evidence that many luminous elliptical galaxies undergo similar inflow spin-up. A small turbulent viscosity is required in NGC 4649 to avoid forming large X-ray luminous disks that are not observed, but the turbulent pressure is small and does not interfere with mass determinations that assume hydrostatic equilibrium.Comment: 21 pages, 9 figures, accepted for publication by Ap

ROSAT Evidence for Intrinsic Oxygen Absorption in Cooling Flow Galaxies and Groups

Using spatially resolved, deprojected ROSAT PSPC spectra of 10 of the brightest cooling flow galaxies and groups with low Galactic column densities we have detected intrinsic absorption over energies ~0.4-0.8 keV in half of the sample. Since no intrinsic absorption is indicated for energies below ~0.4 keV, the most reasonable model for the absorber is collisionally ionized gas at temperatures T=10^{5-6} K with most of the absorption arising from ionized states of oxygen but with a significant contribution from carbon and nitrogen. The soft X-ray emission of this warm gas can explain the sub-Galactic column densities of cold gas inferred within the central regions of most of the systems. Attributing the absorption to ionized gas reconciles the large columns of cold H and He inferred from EINSTEIN and ASCA with the lack of such columns inferred from ROSAT. Within the central ~10-20 kpc, where the constraints are most secure, the estimated mass of the ionized absorber is consistent with most (perhaps all) of the matter deposited by a cooling flow over the lifetime of the flow. Since the warm absorber produces no significant H or He absorption the large absorber masses are consistent with the negligible atomic and molecular H inferred from HI and CO observations of cooling flows. It is also found that if T > ~2x10^5 K then the optical and UV emission implied by the warm gas does not violate published constraints. Finally, we discuss how the prediction of warm ionized gas as the product of mass drop-out in these and other cooling flows can be verified with new CHANDRA and XMM observations. (Abridged)Comment: 17 pages (5 figures), Accepted for publication in ApJ, expanded discussion of multiphase spectral models, theoretical implications of warm gas in cooling flows, and the statistical significance of the oxygen absorptio

The polymer phase of the TDAE-C60_{60} organic ferromagnet

The high-pressure Electron Spin Resonance (ESR) measurements were preformed on TDAE-C$_{60}$ single crystals and stability of the polymeric phase was established in the $P - T$ parameter space. At 7 kbar the system undergoes a ferromagnetic to paramagnetic phase transition due to the pressure-induced polymerization. The polymeric phase remains stable after the pressure release. The depolymerization of the pressure-induced phase was observed at the temperature of 520 K. Below room temperature, the polymeric phase behaves as a simple Curie-type insulator with one unpaired electron spin per chemical formula. The TDAE$^+$ donor-related unpaired electron spins, formerly ESR-silent, become active above the temperature of 320 K and the Curie-Weiss behavior is re-established.Comment: Submitted to Phys. Rev.