Generalised ladders and single-valued polylogarithms

We introduce and solve an infinite class of loop integrals which generalises the well-known ladder series. The integrals are described in terms of single-valued polylogarithmic functions which satisfy certain differential equations. The combination of the differential equations and single-valued behaviour allow us to explicitly construct the polylogarithms recursively. For this class of integrals the symbol may be read off from the integrand in a particularly simple way. We give an explicit formula for the simplest generalisation of the ladder series. We also relate the generalised ladder integrals to a class of vacuum diagrams which includes both the wheels and the zigzags.Comment: 27 pages, 7 figure

Pan-cancer analysis of whole genomes

Cancer is driven by genetic change, and the advent of massively parallel sequencing has enabled systematic documentation of this variation at the whole-genome scale(1-3). Here we report the integrative analysis of 2,658 whole-cancer genomes and their matching normal tissues across 38 tumour types from the Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium of the International Cancer Genome Consortium (ICGC) and The Cancer Genome Atlas (TCGA). We describe the generation of the PCAWG resource, facilitated by international data sharing using compute clouds. On average, cancer genomes contained 4-5 driver mutations when combining coding and non-coding genomic elements; however, in around 5% of cases no drivers were identified, suggesting that cancer driver discovery is not yet complete. Chromothripsis, in which many clustered structural variants arise in a single catastrophic event, is frequently an early event in tumour evolution; in acral melanoma, for example, these events precede most somatic point mutations and affect several cancer-associated genes simultaneously. Cancers with abnormal telomere maintenance often originate from tissues with low replicative activity and show several mechanisms of preventing telomere attrition to critical levels. Common and rare germline variants affect patterns of somatic mutation, including point mutations, structural variants and somatic retrotransposition. A collection of papers from the PCAWG Consortium describes non-coding mutations that drive cancer beyond those in the TERT promoter(4); identifies new signatures of mutational processes that cause base substitutions, small insertions and deletions and structural variation(5,6); analyses timings and patterns of tumour evolution(7); describes the diverse transcriptional consequences of somatic mutation on splicing, expression levels, fusion genes and promoter activity(8,9); and evaluates a range of more-specialized features of cancer genomes(8,10-18).Peer reviewe

Secondary Metabolites from Turkish Astragalus Species

The genus Astragalus belonging to the Leguminosae family is a widely distributed plant throughout the temperate regions of the world. This plant species is used in various traditional and folklore medicines for the treatment of nephritis, diabetes, and uterine cancer and as antiperspirant, diuretic, and tonic. In Turkish folk medicine, the aqueous extracts of some Astragalus species are used to treat leukemia as well as for wound healing. The present chapter shall discuss about the secondary metabolites extracted from this plant species along with their uses in eradicating various ailments. © Springer Nature Switzerland AG 2019