Reviewing evidence of marine ecosystem change off South Africa

Recent changes have been observed in South African marine ecosystems. The main pressures on these ecosystems are fishing, climate change, pollution, ocean acidification and mining. The best long-term datasets are for trends in fishing pressures but there are many gaps, especially for non-commercial species. Fishing pressures have varied over time, depending on the species being caught. Little information exists for trends in other anthropogenic pressures. Field observations of environmental variables are limited in time and space. Remotely sensed satellite data have improved spatial and temporal coverage but the time-series are still too short to distinguish long-term trends from interannual and decadal variability. There are indications of recent cooling on the West and South coasts and warming on the East Coast over a period of 20 - 30 years. Oxygen concentrations on the West Coast have decreased over this period. Observed changes in offshore marine communities include southward and eastward changes in species distributions, changes in abundance of species, and probable alterations in foodweb dynamics. Causes of observed changes are difficult to attribute. Full understanding of marine ecosystem change requires ongoing and effective data collection, management and archiving, and coordination in carrying out ecosystem research.DHE

BioTIME 2.0: Expanding and Improving a Database of Biodiversity Time Series

Motivation Here, we make available a second version of the BioTIME database, which compiles records of abundance estimates for species in sample events of ecological assemblages through time. The updated version expands version 1.0 of the database by doubling the number of studies and includes substantial additional curation to the taxonomic accuracy of the records, as well as the metadata. Moreover, we now provide an R package (BioTIMEr) to facilitate use of the database. Main Types of Variables Included The database is composed of one main data table containing the abundance records and 11 metadata tables. The data are organised in a hierarchy of scales where 11,989,233 records are nested in 1,603,067 sample events, from 553,253 sampling locations, which are nested in 708 studies. A study is defined as a sampling methodology applied to an assemblage for a minimum of 2 years. Spatial Location and Grain Sampling locations in BioTIME are distributed across the planet, including marine, terrestrial and freshwater realms. Spatial grain size and extent vary across studies depending on sampling methodology. We recommend gridding of sampling locations into areas of consistent size. Time Period and Grain The earliest time series in BioTIME start in 1874, and the most recent records are from 2023. Temporal grain and duration vary across studies. We recommend doing sample-level rarefaction to ensure consistent sampling effort through time before calculating any diversity metric. Major Taxa and Level of Measurement The database includes any eukaryotic taxa, with a combined total of 56,400 taxa. Software Format csv and. SQL

Life strategies, energetics and growth characteristics of Calanoides carinatus (Copepoda) in the Angola-Benguela frontal region

Rates of daily egg production, moulting and egg hatching success, as well as total lipid content and composition of Calanoides carinatus, were measured in the region of the southern Angola Current (SAC), the Angola-Benguela Front (ABF) and the coastal upwelling area of the northern Benguela Current (NBC) system during February–March 2002. There were distinct differences in the vertical distribution, growth characteristics, lipid content and composition of populations in the SAC/ABF and NBC regions, indicative of different physiological states. Whereas in the NBC, C. carinatus was actively growing in response to elevated chlorophyll a levels associated with coastal upwelling, it comprised deep-living C5 copepodids with very large wax ester reserves (c. 40–50% dry mass) and extremely low metabolism in the SAC/ABF, suggesting diapause. This study provides the first data on lipid composition (lipid classes, fatty acids and alcohols) of this copepod in the region; in particular, the diapausing C5s contained high levels of long-chain, mono-unsaturated fatty acids (23% of all fatty acids) and alcohols (69% of all fatty alcohols) in addition to trophic markers of diatoms, viz. 16:1(n-7) and 20:5(n-3). Based on total lipid content, the maximum survival time of the diapausal component of C. carinatus was estimated to be 149–192 days, whereas active surface-dwelling C5s and females could not survive for more than 10 days without feeding.Keywords: Angola-Benguela Front, Calanoides carinatus, diapause, growth rates, lipid content and composition, northern Benguela upwelling, oxygen minimum layer, vertical distribution African Journal of Marine Science 2005, 27(3): 641–65